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Appendix 1 thesis 100%

Description Max score Total score Query cover E value Ident Accession Vicia faba isolate 7612 tRNA­Leu (trnL) gene, partial sequence; chloroplast 134 134 100% 1e­28 99% KJ787213.1 Vicia faba plastid, complete genome 134 134 100% 1e­28 99% KF042344.1 Vicia faba isolate HS879 tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 134 134 100% 1e­28 99% JX505737.1 Vicia faba var. minor tRNA­Leu (trnL) gene, partial sequence; chloroplast 134 134 100% 1e­28 99% JN617168.1 Vicia faba var. major tRNA­Leu (trnL) gene, partial sequence; chloroplast 134 134 100% 1e­28 99% JN617167.1 Vicia faba chloroplast transfer RNA­ Leu(CAA) 134 134 100% 1e­28 99% M55084.1 Vicia faba chloroplast tRNA­Leu, tRNA­Phe, tRNA­His, ORFX, NADH­deydrogenase genes & partial sequence ORFx & psbA genes 134 134 100% 1e­28 99% X51471.1 Broad bean chloroplast genes for tRNA­ Leu(CAA) and (UAA) and tRNA­Phe 134 134 100% 1e­28 99% X02444.1 Melilotus albus isolate xt_plant115 tRNA­ Leu (trnL) gene, intron; chloroplast 122 122 100% 8e­25 95% KJ746436.1 Tracheophyta environmental sample clone N­11 tRNA­Leu (trnL) gene, partial sequence; chloroplast 122 122 100% 8e­25 95% KF616419.1 Tracheophyta environmental sample clone N­3 tRNA­Leu (trnL) gene, partial sequence; chloroplast 122 122 100% 8e­25 95% KF616411.1 122 122 100% 8e­25 95% KF616414.1 Tracheophyta environmental sample clone N­5 tRNA­Leu (trnL) gene, partial sequence; chloroplast 122 122 100% 8e­25 95% KF616413.1 Tracheophyta environmental sample clone N­4 tRNA­Leu (trnL) gene, partial sequence; chloroplast 122 122 100% 8e­25 95% KF616412.1 Melilotus alba tRNA­Leu (trnL) gene, intron; chloroplast 122 122 100% 8e­25 95% DQ311713.1 Melilotus alba chloroplast tRNA­Leu (trnL) gene, intron sequence 122 122 100% 8e­25 95% AF124232.1 Tracheophyta environmental sample clone N­1 tRNA­Leu (trnL) gene, partial sequence; chloroplast 120 120 100% 3e­24 94% KF616409.1 Tracheophyta environmental sample clone N­2 tRNA­Leu (trnL) gene, partial sequence; chloroplast 116 116 100% 4e­23 94% KF616410.1 Vicia cypria isolate HS866 tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 113 113 100% 4e­22 92% JX505734.1 Vicia koeieana isolate 7619 tRNA­Leu (trnL) gene, partial sequence; chloroplast 111 111 100% 1e­21 91% KJ787256.1 Vicia lunata isolate V25 tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 111 111 100% 1e­21 89% JX505749.1 Ononis hirta tRNA­Leu (trnL) gene and trnL­ trnF intergenic spacer, partial sequence; chloroplast 111 111 100% 1e­21 93% GQ488565.1 Ononis dentata tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 111 111 100% 1e­21 89% GQ488559.1 Tracheophyta environmental sample clone N­6 tRNA­Leu (trnL) gene, partial sequence; chloroplast http://blast.ncbi.nlm.nih.gov/Blast.cgi 2/7 2/11/2016 NCBI Blast:c2 Trigonella suavissima isolate EC 583624 tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 109 109 100% 5e­21 88% JX274187.1 Trigonella suavissima isolate EC 583623 tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 109 109 100% 5e­21 88% JX274186.1 Ononis varelae tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 109 109 100% 5e­21 91% GQ488605.1 Astragalus pectinatus isolate CP18 tRNA­ Leu (trnL) gene, partial sequence; chloroplast 107 107 100% 2e­20 90% KP208342.1 Astragalus hemsleyi chloroplast gene for tRNA­Leu and trnL­trnF intergenic spacer, specimen_voucher: TARI:69578, partial sequence 107 107 100% 2e­20 90% AB485940.1 Astragalus polaris tRNA­Leu (trnL) gene, partial sequence; chloroplast 107 107 100% 2e­20 90% GQ244622.1 Astragalus polaris tRNA­Leu (trnL) gene, intron 107 107 100% 2e­20 90% DQ860525.1 Astragalus layneae voucher ASLA­4 tRNA­ Leu (trnL) gene, partial sequence; and trnL­ trnF intergenic spacer, complete sequence; chloroplast 107 107 100% 2e­20 90% DQ403850.1 Astragalus layneae voucher ASLA­1 tRNA­ Leu (trnL) gene, partial sequence; and trnL­ trnF intergenic spacer, complete sequence; chloroplast 107 107 100% 2e­20 90% DQ403849.1 Astragalus didymocarpus voucher ASDI­16 tRNA­Leu (trnL) gene, partial sequence; and trnL­trnF intergenic spacer, complete sequence; chloroplast 107 107 100% 2e­20 90% DQ403848.1 Astragalus didymocarpus voucher ASDI­2 tRNA­Leu (trnL) gene, partial sequence; and trnL­trnF intergenic spacer, complete sequence; chloroplast 107 107 100% 2e­20 90% DQ403847.1 Astragalus didymocarpus voucher ASDI­1 tRNA­Leu (trnL) gene, partial sequence; and trnL­trnF intergenic spacer, complete sequence; chloroplast 107 107 100% 2e­20 90% DQ403846.1 Nicotiana trigonophylla chloroplast partial tRNA­Leu gene, IGS and partial tRNA­Phe gene 107 107 100% 2e­20 91% AJ577438.2 Nicotiana bigelovii chloroplast partial tRNA­ Leu gene, IGS and partial tRNA­Phe gene 107 107 100% 2e­20 91% AJ577437.1 Nicotiana palmeri chloroplast partial tRNA­ Leu gene, IGS and partial tRNA­Phe gene 107 107 100% 2e­20 91% AJ577406.1 Astragalus linifolius chloroplast tRNA­Leu (trnL) gene, intron sequence 107 107 100% 2e­20 90% AF126978.1 Astragalus bodinii chloroplast tRNA­Leu (trnL) gene, intron sequence 107 107 100% 2e­20 90% AF126977.1 Astragalus gilviflorus chloroplast tRNA­Leu (trnL) gene, intron sequence 107 107 100% 2e­20 90% AF126976.1 Astragalus douglasii chloroplast tRNA­Leu (trnL) gene, intron sequence 107 107 100% 2e­20 90% AF126974.1 Astragalus palanae var. palanae chloroplast tRNA­Leu (trnL) gene, intron sequence 107 107 100% 2e­20 90% AF126971.1 Astragalus sabulonum chloroplast tRNA­ Leu (trnL) gene, intron sequence 107 107 100% 2e­20 90% AF126969.1 Melilotus officinalis isolate CP46 tRNA­Leu (trnL) gene, partial sequence; chloroplast 105 105 100% 6e­20 85% KP208370.1 Astragalus flexuosus isolate CP17 tRNA­ Leu (trnL) gene, partial sequence; chloroplast 105 105 98% 6e­20 90% KP208341.1 Melilotus officinalis isolate xt_plant51 tRNA­ http://blast.ncbi.nlm.nih.gov/Blast.cgi 3/7 2/11/2016 NCBI Blast:c2 Leu (trnL) gene, intron; chloroplast 105 105 100% 6e­20 85% KJ746435.1 Trigonella balansae isolate EC 546586 tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 105 105 100% 6e­20 85% JX274188.1 Trigonella maritima isolate EC 583601 tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 105 105 100% 6e­20 86% JX274171.1 Trigonella cretica isolate EC 583577 tRNA­ Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 105 105 100% 6e­20 85% JX274153.1 Trigonella cretica isolate EC 583576 tRNA­ Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 105 105 100% 6e­20 85% JX274152.1 Trigonella cretica isolate EC 583575 tRNA­ Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 105 105 100% 6e­20 85% JX274151.1 Trigonella coerulescens isolate EC 583574 tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 105 105 100% 6e­20 85% JX274150.1 Trigonella coerulescens isolate EC 583573 tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 105 105 100% 6e­20 85% JX274149.1 Trigonella caerulea isolate EC 583569 tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 105 105 100% 6e­20 85% JX274147.1 Trigonella caerulea isolate EC 583567 tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 105 105 100% 6e­20 85% JX274145.1 Trigonella balansae isolate EC 583507 tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 105 105 100% 6e­20 85% JX274137.1 Trigonella anguina isolate EC 583495 tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 105 105 100% 6e­20 85% JX274134.1 Melilotus officinalis voucher personal collection:I. Hiiesalu 47 tRNA­Leu (trnL) gene, partial sequence; chloroplast 105 105 100% 6e­20 85% HM590318.1 Trigonella caerulea tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 105 105 100% 6e­20 85% GQ488615.1 Ononis speciosa tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 105 105 100% 6e­20 86% GQ488593.1 Ononis reclinata subsp. reclinata tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 105 105 100% 6e­20 88% GQ488586.1 Ononis filicaulis tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 105 105 100% 6e­20 88% GQ488561.1 Ononis cristata subsp. cristata tRNA­Leu (trnL) gene and trnL­trnF intergenic spacer, partial sequence; chloroplast 105 105 100% 6e­20 90% GQ488558.1 Melilotus albus chloroplast DNA, tRNA­Leu (trnL) and trnL­trnF intergenic spacer, partial sequence, specimen_voucher:

https://www.pdf-archive.com/2016/02/12/appendix-1-thesis/

12/02/2016 www.pdf-archive.com

herbs spices1 77%

32Ge 32 Ge Gale (Myrica gale) Bog myrtle, Candle berry, Sweet gale 50Sn 50 Sn 9F 8O 15P 15 P Perilla (Perilla frutescens) Beefsteak plant, Chinese Basil, Wild sesame 33As 33As Anise (Pimpinella anisum) Sweet cumin, Aniseed 51Sb 51 Sb Oregano Origanum vulgare Oregan, Wild marjoram 16S Savory (Satureja hortensis) 34Se 10 Ne Fenugreek Cloves (Syzygium aromaticum) 35 Br Borage (Borago officinalis) Beebread, Bugloss, Burrage Sesame (Sesamum indicum) Gingelly, Semsem 52Te 53I 52 Te 53 I 62Sm 62 Sm Sumac (Rhus coriaria L.) Shumac, Sicilian sumac 94Pu 94 Pu Oilseed Pumpkin (Cucurbita pepo L.) Pumpkinseeds Fagot cassia, Jawa cassia, Padang cinnamon Myrtle (Myrtus communis) 63Eu 63 Eu Blue Fenugreek (Trigonella caerulea) Blue melilot, Blue-white clover, Blue-white trigonella, Curd herb, Sweet trefoil 95Am 95 Am Almond (Prunus dulcis) 64Gd 64 Gd Saffron (Crocus sativus) Indian Bay-leaf (Cinnamomum tamala Chamelion Plant (Houttuynia cordata) Chinese lizard tail, Fishwort, Heartleaf 82Pb 82 Pb Bengal pepper (Piper longum and Piper retrofractum), Balinese pepper, Jaborandi pepper, Long Pepper Sweet Basil (Ocimum basilicum) Basil, Basilie 83Bi 83 Bi Black Cumin (Bunium persicum) Black cummin Hedge mustard, Mexican tea, Jerusalem parsley, West Indian goosefoot, Skunkweed, Wormseed Sweet pigweed 84Po Fingerroot (Boesenbergi apandurata) Chinese ginger, Chinese key, Lesser ginger 85At 84 Po 85 At Poppy (Papaver somniferum) Garden poppy, Opium poppy Annatto (Bixa orellana) Achiote, Lipstick tree 111Rg 111 Rg Garden cress (Lepidium sativum) 96Cm 96 Cm Cardamom (Elettaria cardamomum) Green Cardamom Arugula (Eruca sativa L.) Rocket, Salad Rocket 65Tb 65 Tb Tonka Bean (Dipteryx odorata) Tonco bean, Tonquin bean 97Bk 97 Bk Black Mustard (Brassica nigra) Black mustard seed, Brown mustard seed, Indian mustard 66Dy 67Ho 66 Dy 67 Ho Dill (Anethum graveolens) 98 Cf 98Cf Curry leaf (Murraya koenigii) 18Ar 18 Ar Grains of Paradise (Aframomum melegueta) Guinea grains, Melegueta pepper, Alligator pepper 36Kr 36 Kr Kaffir Lime (Citrus hystrix) Indonesian lime leaves, Wild lime 54 Xe Indonesian Cinnamon (Cinnamomum burmannii) Hyssop (Hyssopus officinalis) Lemon (Citrus limon) (Trigonella foenum-graecum) 17 Cl 35Br 34 Se Cayenne pepper, Chili Red pepper 10Ne 9F 17Cl 16 S Chile (Capsicum frutescens et al.) 54Xe Epazote 81 Tl (Pandanus odoratissimus) 7N 8O 7N Chaste Tree (Vitex agnus-castus) Hemptree, Agnus castus, Abraham's balm (Chenopodium ambrosioides) 81Tl 80 Hg 6C Garlic (Allium sativum) Garlick Ginger (Zingiber officinale) 48Cd 6C 2He Horseradish (Armoracia rusticana) 99Es 99 Es Siamese ginger (Alpinia galanga) Greater Galangale, Galangale 68Er 68 Er Juniper (Juniperus communis) 100Fm 100 Fm Mexican Pepper-leaf (Piper auritum) Sacred pepper, Root beer plant, Eared pepper 69Tm 69 Tm Tamarind (Tamarindus indica) Indian date 101Md 101 Md White Mustard (Sinapis alba) White mustard seed 70Yb 71Lu 70 Yb 71 Lu Indonesian Bay-leaf (Eugenia polyantha) 102No 102 No Onion (Allium cepa L.) Scallion Laurel (Laurus nobilis) (Sweet) Bay leaf, Sweet laurel 103Lr 103 Lr Celery (Apium graveolens) Celeriac (root celery) Chervil (Anthriscus cerefolium) French parsley, Garden chervil 86 Rn 86Rn Orange (Citrus sinensis)

https://www.pdf-archive.com/2014/12/22/herbs-spices1/

22/12/2014 www.pdf-archive.com